Publications
- Multi-omic landscape of human gliomas from diagnosis to treatment and recurrence (2025)
bioRxiv
Piyadasa, Oberlton, Ribi, Ranek, Averbukh, Leow, Amouzgar, Liu, Greenwald, McCaffrey, Kumar, Ferrian, Tsai, Filiz, Fullaway, Bosse, Varra, Kong, Sowers, Gephart, Nunez-Perez, Yang, Travers, Schachter, Liang, Santi, Bucktrout, Gherardini, Cole, Barish, Brown, Oldridge, Drake, Phillips, Okada, Prins, Bendall, Angelo
- Temporal and spatial composition of the tumor microenvironment predicts response to immune checkpoint inhibition (2025)
bioRxiv
Greenwald, Nederlof, Sowers, Ding, Park, Kong, Houlahan, Varra, Graaf, Geurts, Liu, Ranek, Voorwerk, Maaker, Kagel, McCaffrey, Khan, Yeh, Fullaway, Khair, Bai, Piyadasa, Risom, Delmastro, Hartmann, Mangiante, Sotomayor-Vivas, Schumacher, Ma, Bosse, Vijver, Tibshirani, Horlings, Curtis, Kok, Angelo
- Automated classification of cellular expression in multiplexed imaging data with Nimbus (2024)
bioRxiv
Rumberger, Greenwald, Ranek, Boonrat, Walker, Franzen, Varra, Kong, Sowers, Liu, Averbukh, Piyadasa, Vanguri, Nederlof, Wang, Van Valen, Kok, Hollmann, Kainmueller, Angelo
- Robust phenotyping of highly multiplexed tissue imaging data using pixel-level clustering (2023)
Nature Communications Vol 14 (1): 4618
Liu, Greenwald, Kong, McCaffrey, Leow, Mrdjen, Cannon, Rumberger, Varra, Angelo